Workshop: Interoperability between R and Python using BiocPy Workshop

Publicado el: 25 agosto 2024
en el canal de: Bioconductor

110

The BiocPy project aims to facilitate development of Bioconductor workflows in Python. This workshop will provide an overview of the core data structures implemented in BiocPy (e.g., GenomicRanges, SummarizedExperiment) that were ported from R. Participants will be guided through two Bioconductor-derived workflows in Python. The first will involve reading an RDS file containing genomic ranges and performing downstream range-based analyses. The second will use the scRNAseq package to access public single-cell RNA-seq datasets, followed by cell type annotation using the SinglePy package. Attendees will learn how to represent and manipulate their datasets in Python in the same manner as in R/Bioconductor. All packages in BiocPy are published to PyPI and code is opensource @ https://github.com/BiocPy.

Jayaram Kancherla

En esta página del sitio puede ver el video en línea Workshop: Interoperability between R and Python using BiocPy Workshop de Duración hora minuto segunda en buena calidad , que subió el usuario Bioconductor 25 agosto 2024, comparta el enlace con amigos y conocidos, en youtube este video ya ha sido visto 110 veces y le gustó 1 a los espectadores. Disfruta viendo!

387